Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
251 556

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,26:01 18:01,35:03 04:01,07:01 03:02,05:01 None 03:02,03:02 11:04,04:03
RPKM HLA_DQB1 rpkm 45.76 ; HLA_A rpkm 236.92 ; HLA_DQA1 rpkm 51.84 ; HLA_DRB1 rpkm 26.19 ; HLA_C rpkm 373.1 ; HLA_B rpkm 447.83
Note In HLA_DQB1 03:02 , HLA_A 26:01 , HLA_DQA1 03:02 , HLA_DRB1 11:04 and 04:03 , HLA_C 07:01 , HLA_B 35:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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