Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
152 355

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,02:01 08:01,27:05 07:06,02:02 05:02,05:02 None None 11:01,04:03
RPKM HLA_DQA1 rpkm 0.04 ; HLA_A rpkm 301.84 ; HLA_C rpkm 196.26 ; HLA_DRB1 rpkm 0.1 ; HLA_B rpkm 235.0
Note In HLA_DQA1 05:02 , HLA_C 07:06 , HLA_DRB1 11:01 and 04:03 , HLA_B 27:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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