Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Male Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
332 730

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 52:01,15:01 12:02,12:02 01:03,03:02 None 06:01,03:03 15:02,04:06
RPKM HLA_DRB1 rpkm 318.69 ; HLA_DQB1 rpkm 48.48 ; HLA_DQA1 rpkm 70.6 ; HLA_A rpkm 240.87 ; HLA_B rpkm 10.33 ; HLA_C rpkm 43.49
Note In HLA_DRB1 15:02 and 04:06 , HLA_DQB1 03:03 , HLA_DQA1 01:03 and 03:02 , HLA_B 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Male Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background