Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Male Age None
Ethnicity None Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
217 485

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,40:01 03:04,07:01 None None 06:04,06:04 14:19,14:19
RPKM HLA_A rpkm 162.07 ; HLA_B rpkm 339.38 ; HLA_C rpkm 338.27 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.03
Note In HLA_B 40:01 , HLA_C 03:04 and 07:01 , HLA_DQB1 06:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Male Age None
Ethnicity None Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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