Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
90 100

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,40:01 03:04,07:01 04:01,02:01 None None 11:01,11:01
RPKM HLA_DRB1 rpkm 0.07 ; HLA_C rpkm 143.32 ; HLA_B rpkm 208.36 ; HLA_DQA1 rpkm 0.04 ; HLA_A rpkm 113.17
Note In HLA_C 03:04 and 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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