Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
298 683

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,03:01 08:01,35:01 04:01,07:01 03:02,01:03 None 06:03,03:09 13:01,04:01
RPKM HLA_A rpkm 52.77 ; HLA_DQA1 rpkm 95.02 ; HLA_B rpkm 95.87 ; HLA_C rpkm 66.9 ; HLA_DRB1 rpkm 90.64 ; HLA_DQB1 rpkm 33.28
Note In HLA_DQA1 03:02 and 01:03 , HLA_C 07:01 , HLA_DRB1 13:01 and 04:01 , HLA_DQB1 06:03 and 03:09. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype B_cell_lymphoma_unspecified
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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