Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Bone

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
719 852

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,68:02 07:02,35:08 07:02,03:04 03:02,02:01 None 02:01,02:01 14:05,13:01
RPKM HLA_C rpkm 36.7 ; HLA_DQB1 rpkm 78.96 ; HLA_A rpkm 1.77 ; HLA_DQA1 rpkm 4.62 ; HLA_DRB1 rpkm 1.33 ; HLA_B rpkm 9.61
Note In HLA_DQA1 03:02 , HLA_DRB1 14:05 and 13:01 , HLA_B 35:08. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Bone
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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