Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
402 867

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:17,02:17 41:01,40:02 02:02,17:01 01:02,01:02 02:01:02,17:01 02:02,03:04 13:05,13:05
RPKM HLA_C rpkm nan ; HLA_C rpkm 123.07 ; HLA_A rpkm nan ; HLA_B rpkm nan ; HLA_B rpkm 186.94 ; HLA_DQB1 rpkm nan ; HLA_DPB1 rpkm nan ; HLA_A rpkm 492.2 ; HLA_DRB1 rpkm nan ; HLA_DRB1 rpkm 4.32 ; HLA_DQA1 rpkm 0.08 ; HLA_DQB1 rpkm 0.07
Note In HLA_B 40:02 , HLA_A 02:17 , HLA_DRB1 13:05 , HLA_DQA1 01:02 , HLA_DQB1 02:02 and 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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