Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pericardial_effusion

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
754 1822

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,24:02 58:05,37:04 07:01,07:01 None None 06:13,06:13 None
RPKM HLA_A rpkm 5.32 ; HLA_B rpkm 0.69 ; HLA_C rpkm 40.73 ; HLA_DQB1 rpkm 0.36
Note In HLA_A 01:01 and 24:02 , HLA_C 07:01 , HLA_DQB1 06:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pericardial_effusion
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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