Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Cervix Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
190 453

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,32:03 08:01,44:02 07:01,05:01 None None None None
RPKM HLA_A rpkm 51.04 ; HLA_B rpkm 29.24 ; HLA_C rpkm 40.25
Note In HLA_A 32:03 , HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Cervix Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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