Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
267 547

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,01:01 08:01,35:08 07:01,07:01 05:01,05:01 None 03:04,02:02 12:05,14:46
RPKM HLA_B rpkm 11.5 ; HLA_DQA1 rpkm 1.07 ; HLA_DRB1 rpkm 1.05 ; HLA_C rpkm 45.99 ; HLA_A rpkm 100.21 ; HLA_DQB1 rpkm 0.65
Note In HLA_B 35:08 , HLA_DRB1 12:05 , HLA_C 07:01 , HLA_DQB1 03:04 and 02:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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