Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
166 341

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,03:01 37:01,07:02 07:02,07:02 01:01,01:01 None 06:13,05:01 10:01,15:01
RPKM HLA_C rpkm 118.0 ; HLA_A rpkm 146.96 ; HLA_B rpkm 140.98 ; HLA_DRB1 rpkm 77.72 ; HLA_DQA1 rpkm 38.93 ; HLA_DQB1 rpkm 34.69
Note In HLA_A 24:02 , HLA_DRB1 15:01 , HLA_DQA1 01:01 , HLA_DQB1 06:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_b_cell_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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