Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity White, Caucasian Tumour Source Metastasis, Adrenal

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
203 455

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:01 40:16,40:16 07:01,07:01 04:01,01:02 None None 16:05,04:07
RPKM HLA_B rpkm 0.1 ; HLA_C rpkm 0.82 ; HLA_A rpkm 45.66 ; HLA_DRB1 rpkm 0.05 ; HLA_DQA1 rpkm 0.03
Note In HLA_C 07:01 , HLA_DRB1 16:05 and 04:07 , HLA_DQA1 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity White, Caucasian Tumour Source Metastasis, Adrenal
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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