Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin
Primary Histology Lymphoid_neoplasm Histology Subtype Mycosis_fungoides-Sezary_syndrome
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
82 91

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,01:01 08:01,27:05 15:02,07:01 05:01,02:01 None 02:01,02:01 03:01,07:01
RPKM HLA_C rpkm 177.13 ; HLA_DRB1 rpkm 166.21 ; HLA_DQB1 rpkm 65.17 ; HLA_DQA1 rpkm 150.3 ; HLA_A rpkm 636.91 ; HLA_B rpkm 492.13
Note In HLA_C 15:02 and 07:01 , HLA_DRB1 03:01 , HLA_DQB1 02:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin
Primary Histology Lymphoid_neoplasm Histology Subtype Mycosis_fungoides-Sezary_syndrome
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background