Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Mixed_adenosquamous_carcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
348 769

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:02 40:01,40:01 03:04,03:04 05:02,05:02 None 03:09,03:09 11:01,03:17
RPKM HLA_A rpkm 203.04 ; HLA_DQB1 rpkm 1.11 ; HLA_DRB1 rpkm 5.14 ; HLA_B rpkm 157.46 ; HLA_C rpkm 155.93 ; HLA_DQA1 rpkm 0.08
Note In HLA_A 26:02 , HLA_DQB1 03:09 , HLA_DRB1 11:01 and 03:17 , HLA_B 40:01 , HLA_DQA1 05:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Mixed_adenosquamous_carcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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