Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Tubular_adenocarcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Primary, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
384 835

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 48:01,07:02 08:03,04:01 05:01,05:01 None 03:04,03:04 11:01,11:01
RPKM HLA_DQB1 rpkm 0.88 ; HLA_C rpkm 163.91 ; HLA_DRB1 rpkm 1.5 ; HLA_A rpkm 402.58 ; HLA_DQA1 rpkm 0.08 ; HLA_B rpkm 322.11
Note In HLA_DQB1 03:04 , HLA_C 08:03 , HLA_DRB1 11:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Tubular_adenocarcinoma
Gender Male Age Not Available
Ethnicity Asian Tumour Source Primary, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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