Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Unknown Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
194 223

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,24:02 42:01,18:01 12:03,17:01 05:02,05:02 None 03:04,03:04 08:04,11:04
RPKM HLA_DQA1 rpkm 0.06 ; HLA_C rpkm 100.5 ; HLA_DRB1 rpkm 5.67 ; HLA_B rpkm 96.1 ; HLA_A rpkm 233.49 ; HLA_DQB1 rpkm 0.17
Note In HLA_DQA1 05:02 , HLA_DRB1 11:04 , HLA_B 42:01 , HLA_DQB1 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Unknown Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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