Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age None
Ethnicity Black Tumour Source Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
324 721

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,24:02 42:01,18:01 12:03,17:01 05:02,05:02 None 03:04,03:04 08:04,11:04
RPKM HLA_DQA1 rpkm 0.06 ; HLA_C rpkm 100.5 ; HLA_DRB1 rpkm 5.67 ; HLA_B rpkm 96.1 ; HLA_A rpkm 233.49 ; HLA_DQB1 rpkm 0.17
Note In HLA_DQA1 05:02 , HLA_DRB1 11:04 , HLA_B 42:01 , HLA_DQB1 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age None
Ethnicity Black Tumour Source Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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