Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_t_cell_leukaemia
Gender Female Age Not Available
Ethnicity African_american Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1062 2556

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
23:01,30:02 14:02,14:02 08:02,08:02 01:02,02:01 None 06:02,06:02 15:03,11:19
RPKM HLA_DRB1 rpkm 0.25 ; HLA_A rpkm 376.34 ; HLA_DQB1 rpkm 2.25 ; HLA_B rpkm 492.67 ; HLA_DQA1 rpkm 0.03 ; HLA_C rpkm 198.79
Note In HLA_DRB1 15:03 and 11:19 , HLA_B 14:02 , HLA_DQA1 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_t_cell_leukaemia
Gender Female Age Not Available
Ethnicity African_american Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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