Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns, Lymph_node
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemia_of_ambiguous_lineage, Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
159 371

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,03:01 14:02,18:01 15:02,08:02 01:02,01:02 None 06:05,06:05 01:01,13:02
RPKM HLA_A rpkm 79.56 ; HLA_B rpkm 107.03 ; HLA_C rpkm 49.55 ; HLA_DQA1 rpkm 0.11 ; HLA_DQB1 rpkm 1.12 ; HLA_DRB1 rpkm 5.72
Note In HLA_A 68:01 , HLA_C 08:02 , HLA_DQA1 01:02 , HLA_DQB1 06:05 , HLA_DRB1 13:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns, Lymph_node
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_leukaemia_of_ambiguous_lineage, Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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