Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin, Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Malignant_melanoma, Lymphoid_neoplasm Histology Subtype Ns, Hairy_cell_leukaemia
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Lung, Primary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
120 143

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 40:01,13:02 06:02,03:04 01:02,02:01 None 06:11,06:11 15:01,13:02
RPKM HLA_DQA1 rpkm 0.31 ; HLA_DQB1 rpkm 3.67 ; HLA_B rpkm 47.68 ; HLA_A rpkm 697.49 ; HLA_DRB1 rpkm 8.82 ; HLA_C rpkm 81.73
Note In HLA_DQA1 01:02 , HLA_DQB1 06:11 , HLA_B 40:01 , HLA_DRB1 15:01 and 13:02 , HLA_C 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin, Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Malignant_melanoma, Lymphoid_neoplasm Histology Subtype Ns, Hairy_cell_leukaemia
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Lung, Primary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background