Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
3650 10924

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,02:01 67:02,14:02 12:03,12:03 None None 06:13,06:13 14:17,11:30
RPKM HLA_DQB1 rpkm 0.03 ; HLA_B rpkm 0.93 ; HLA_C rpkm 15.27 ; HLA_A rpkm 42.37 ; HLA_DRB1 rpkm 0.1
Note In HLA_DQB1 06:13 , HLA_B 14:02 , HLA_DRB1 14:17 and 11:30. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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