Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Blast_phase_chronic_myeloid_leukaemia
Gender Female Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
98 114

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,02:01 52:01,53:01 04:01,16:01 01:02,05:01 None 03:01,05:01 13:03,12:01
RPKM HLA_DQA1 rpkm 6.2 ; HLA_A rpkm 95.51 ; HLA_B rpkm 164.73 ; HLA_C rpkm 186.67 ; HLA_DRB1 rpkm 46.27 ; HLA_DQB1 rpkm 10.29
Note In HLA_C 16:01 , HLA_DRB1 13:03 and 12:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Blast_phase_chronic_myeloid_leukaemia
Gender Female Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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