Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity African_american Tumour Source Primary, Nan, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
559 1285

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:02,03:01 49:01,07:02 07:01,04:01 03:02,01:02 None 06:02,03:02 15:03,04:05
RPKM HLA_B rpkm 169.25 ; HLA_C rpkm 151.99 ; HLA_DQA1 rpkm 11.45 ; HLA_A rpkm 113.27 ; HLA_DRB1 rpkm 15.78 ; HLA_DQB1 rpkm 4.5
Note In HLA_C 07:01 and 04:01 , HLA_DQA1 03:02 , HLA_DRB1 15:03 , HLA_DQB1 06:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Unknown, Female Age Not Available
Ethnicity African_american Tumour Source Primary, Nan, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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