Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
436 971

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,03:01 08:01,07:05 07:01,07:01 None None 06:04,06:04 15:05,15:05
RPKM HLA_C rpkm 1.87 ; HLA_DRB1 rpkm 0.2 ; HLA_B rpkm 0.14 ; HLA_A rpkm 37.14 ; HLA_DQB1 rpkm 0.03
Note In HLA_C 07:01 , HLA_DRB1 15:05 , HLA_B 07:05 , HLA_DQB1 06:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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