Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
527 628

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:02,68:02 15:10,53:01 03:04,04:01 01:03,01:03 None 05:03,06:08 14:01,13:01
RPKM HLA_A rpkm 140.6 ; HLA_B rpkm 35.25 ; HLA_C rpkm 60.33 ; HLA_DQA1 rpkm 3.59 ; HLA_DQB1 rpkm 31.38 ; HLA_DRB1 rpkm 78.71
Note In HLA_B 15:10 and 53:01 , HLA_C 03:04 , HLA_DQA1 01:03 , HLA_DQB1 06:08 , HLA_DRB1 14:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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