Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
595 1447

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,24:02 51:01,35:02 15:02,04:01 None None 05:01,03:04 01:01,11:04
RPKM HLA_A rpkm 1162.44 ; HLA_DQB1 rpkm 0.74 ; HLA_DRB1 rpkm 1.75 ; HLA_B rpkm 735.35 ; HLA_C rpkm 881.73
Note In HLA_A 02:01 , HLA_DQB1 03:04 , HLA_DRB1 11:04 , HLA_B 35:02 , HLA_C 15:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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