Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
785 1998

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,32:01 08:01,07:02 07:01,07:01 None None 06:13,06:13 15:01,15:01
RPKM HLA_A rpkm 5.93 ; HLA_B rpkm 5.48 ; HLA_C rpkm 35.77 ; HLA_DQB1 rpkm 0.16 ; HLA_DRB1 rpkm 0.86
Note In HLA_C 07:01 , HLA_DQB1 06:13 , HLA_DRB1 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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