Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Soft_tissue

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1354 3585

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,30:01 14:02,14:02 08:02,08:02 01:02,01:02 None 06:09,06:09 13:01,09:07
RPKM HLA_DQB1 rpkm 4.24 ; HLA_DQA1 rpkm 0.06 ; HLA_B rpkm 35.26 ; HLA_A rpkm 85.72 ; HLA_C rpkm 42.74 ; HLA_DRB1 rpkm 0.32
Note In HLA_DQB1 06:09 , HLA_DQA1 01:02 , HLA_B 14:02 , HLA_DRB1 13:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Soft_tissue
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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