Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
741 1819

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,11:01 40:01,51:01 05:01,03:04 01:02,03:02 None 06:01,06:01 15:01,13:44
RPKM HLA_DQB1 rpkm 0.02 ; HLA_DRB1 rpkm 0.04 ; HLA_C rpkm 20.94 ; HLA_DQA1 rpkm 0.05 ; HLA_B rpkm 13.82 ; HLA_A rpkm 23.92
Note In HLA_DQB1 06:01 , HLA_DRB1 15:01 , HLA_DQA1 01:02 and 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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