Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
554 1389

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 40:01,44:02 03:04,16:04 01:02,03:02 None 06:02,06:02 15:01,13:07
RPKM HLA_A rpkm 143.91 ; HLA_DRB1 rpkm 3.03 ; HLA_B rpkm 22.5 ; HLA_DQA1 rpkm 0.2 ; HLA_C rpkm 54.42 ; HLA_DQB1 rpkm 12.06
Note In HLA_B 40:01 , HLA_DQA1 01:02 and 03:02 , HLA_C 16:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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