Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
681 825

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,29:02 44:03,15:27 03:03,16:01 03:02,03:02 None 05:03,05:03 09:07,09:07
RPKM HLA_DQA1 rpkm 0.04 ; HLA_B rpkm 1.83 ; HLA_A rpkm 16.17 ; HLA_DRB1 rpkm 0.04 ; HLA_C rpkm 10.67 ; HLA_DQB1 rpkm 0.04
Note In HLA_DQA1 03:02 , HLA_B 44:03 and 15:27 , HLA_A 29:02 , HLA_C 16:01 , HLA_DQB1 05:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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