Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Soft_tissue

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
467 1097

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:03,03:01 51:01,15:18 07:04,07:04 None None None 03:17,11:30
RPKM HLA_B rpkm 9.19 ; HLA_DRB1 rpkm 0.05 ; HLA_A rpkm 64.33 ; HLA_C rpkm 82.5
Note In HLA_B 51:01 and 15:18 , HLA_DRB1 03:17 and 11:30 , HLA_A 24:03 , HLA_C 07:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Soft_tissue
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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