Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
596 1456

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 08:01,07:02 07:06,07:06 03:02,03:02 None 05:03,05:03 03:05,14:01
RPKM HLA_DRB1 rpkm 1.9 ; HLA_C rpkm 126.05 ; HLA_DQB1 rpkm 0.79 ; HLA_DQA1 rpkm 0.06 ; HLA_B rpkm 17.41 ; HLA_A rpkm 97.06
Note In HLA_DRB1 03:05 and 14:01 , HLA_C 07:06 , HLA_DQB1 05:03 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Adenocarcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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