Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
319 757

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,24:02 44:03,51:01 04:01,01:02 None None 03:09,05:01 11:01,03:17
RPKM HLA_DQB1 rpkm 0.13 ; HLA_DRB1 rpkm 0.47 ; HLA_C rpkm 184.13 ; HLA_B rpkm 142.16 ; HLA_A rpkm 145.93
Note In HLA_DQB1 03:09 and 05:01 , HLA_DRB1 11:01 and 03:17 , HLA_B 44:03 and 51:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pancreas, Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma, Non_small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background