Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
342 801

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,01:01 08:01,14:02 07:06,07:06 01:02,01:02 None 05:01,03:02 13:07,13:07
RPKM HLA_A rpkm 23.63 ; HLA_DQA1 rpkm 0.02 ; HLA_DRB1 rpkm 0.02 ; HLA_B rpkm 36.49 ; HLA_C rpkm 123.82 ; HLA_DQB1 rpkm 0.14
Note In HLA_DQA1 01:02 , HLA_B 14:02 , HLA_C 07:06 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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