Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
591 1369

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 44:03,44:03 16:01,16:01 02:01,02:01 None 02:02,02:02 07:01,14:18
RPKM HLA_A rpkm 433.51 ; HLA_B rpkm 191.06 ; HLA_C rpkm 178.52 ; HLA_DQA1 rpkm 0.05 ; HLA_DQB1 rpkm 0.02 ; HLA_DRB1 rpkm 0.3
Note In HLA_B 44:03 , HLA_DQB1 02:02 , HLA_DRB1 14:18. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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