Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
204 431

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
34:02,34:02 14:01,07:04 08:02,03:07 None None None None
RPKM HLA_B rpkm 0.46 ; HLA_C rpkm 2.18 ; HLA_A rpkm 39.68
Note In HLA_B 14:01 and 07:04 , HLA_C 03:07. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Bone_marrow
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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