Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Bone_marrow

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
395 942

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,02:01 07:06,51:01 07:01,07:01 None None 04:01,04:01 15:01,15:01
RPKM HLA_C rpkm 2.82 ; HLA_A rpkm 40.67 ; HLA_DQB1 rpkm 0.03 ; HLA_B rpkm 0.13 ; HLA_DRB1 rpkm 0.03
Note In HLA_C 07:01 , HLA_DQB1 04:01 , HLA_B 07:06 and 51:01 , HLA_DRB1 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Bone_marrow
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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