Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity African_american Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1560 4191

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,30:01 42:02,57:01 08:02,08:02 05:02,05:02 None None 13:01,13:01
RPKM HLA_DQA1 rpkm 0.03 ; HLA_DRB1 rpkm 0.05 ; HLA_C rpkm 0.12 ; HLA_A rpkm 46.67 ; HLA_B rpkm 0.34
Note In HLA_DQA1 05:02 , HLA_DRB1 13:01 , HLA_C 08:02 , HLA_B 57:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity African_american Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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