Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
701 1650

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:05 08:20,15:01 01:02,04:01 05:02,03:02 None 06:02,06:02 15:01,16:08
RPKM HLA_DQB1 rpkm 0.81 ; HLA_DQA1 rpkm 0.05 ; HLA_DRB1 rpkm 1.58 ; HLA_C rpkm 54.15 ; HLA_B rpkm 3.18 ; HLA_A rpkm 31.56
Note In HLA_DQB1 06:02 , HLA_DQA1 05:02 and 03:02 , HLA_B 15:01 , HLA_A 02:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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