Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
599 1417

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 07:02,07:02 07:02,07:02 01:02,02:01 None 06:02,06:02 15:01,13:27
RPKM HLA_DQA1 rpkm 0.56 ; HLA_B rpkm 337.65 ; HLA_C rpkm 273.14 ; HLA_DRB1 rpkm 0.4 ; HLA_A rpkm 556.66 ; HLA_DQB1 rpkm 10.54
Note In HLA_DRB1 15:01 and 13:27 , HLA_DQB1 06:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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