Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Ascites

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
273 514

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
32:01,02:01 14:02,51:01 15:02,08:02 01:02,01:02 None 05:01,05:01 01:02,16:01
RPKM HLA_B rpkm 119.17 ; HLA_C rpkm 95.12 ; HLA_A rpkm 89.08 ; HLA_DRB1 rpkm 9.19 ; HLA_DQA1 rpkm 0.78 ; HLA_DQB1 rpkm 0.71
Note In HLA_B 14:02 , HLA_A 32:01 and 02:01 , HLA_DRB1 16:01 , HLA_DQA1 01:02 , HLA_DQB1 05:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Adenocarcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Ascites
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background