Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
145 312

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 57:01,35:01 04:01,06:02 04:01,04:01 None None 13:09,14:43
RPKM HLA_C rpkm 386.14 ; HLA_B rpkm 322.7 ; HLA_DRB1 rpkm 0.03 ; HLA_A rpkm 138.35 ; HLA_DQA1 rpkm 0.03
Note In HLA_DRB1 14:43. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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