Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian, African_american Tumour Source Metastasis, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
325 767

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,02:02 35:118,53:02 04:01,06:02 None None 05:01,05:01 11:01,12:02
RPKM HLA_A rpkm 37.2 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.09 ; HLA_B rpkm 1.52 ; HLA_C rpkm 19.57
Note In HLA_DQB1 05:01 , HLA_DRB1 11:01 and 12:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Pleura Site Subtype Ns
Primary Histology Mesothelioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian, African_american Tumour Source Metastasis, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background