Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Mucoepidermoid_carcinoma
Gender Female Age Not Available
Ethnicity Black, African_american Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
248 579

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:02,74:01 15:17,58:01 07:01,05:01 05:02,05:02 None 06:02,06:02 15:03,04:04
RPKM HLA_C rpkm 65.17 ; HLA_A rpkm 32.37 ; HLA_DQA1 rpkm 0.03 ; HLA_B rpkm 11.28 ; HLA_DQB1 rpkm 1.31 ; HLA_DRB1 rpkm 0.08
Note In HLA_C 07:01 , HLA_DQA1 05:02 , HLA_DQB1 06:02 , HLA_DRB1 15:03 and 04:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Mucoepidermoid_carcinoma
Gender Female Age Not Available
Ethnicity Black, African_american Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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