Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
118 133

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,03:01 41:01,37:01 06:02,06:02 01:02,01:02 None 06:13,06:13 15:01,01:03
RPKM HLA_C rpkm 129.52 ; HLA_B rpkm 29.66 ; HLA_DRB1 rpkm 2.18 ; HLA_A rpkm 116.91 ; HLA_DQA1 rpkm 1.51 ; HLA_DQB1 rpkm 69.48
Note In HLA_DRB1 15:01 and 01:03 , HLA_DQB1 06:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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