Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Bronchioloalveolar_adenocarcinoma, Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pericardial_effusion

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
594 1360

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:01 44:03,38:01 16:02,16:02 None None 06:07,06:07 13:23,14:103
RPKM HLA_A rpkm 245.36 ; HLA_B rpkm 39.45 ; HLA_DQB1 rpkm 0.02 ; HLA_DRB1 rpkm 0.07 ; HLA_C rpkm 90.83
Note In HLA_A 02:01 , HLA_B 44:03 , HLA_DQB1 06:07 , HLA_DRB1 13:23. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Bronchioloalveolar_adenocarcinoma, Adenocarcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pericardial_effusion
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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