Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Mixed_adenosquamous_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
351 792

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
25:01,25:01 58:01,27:05 07:01,01:03 03:02,03:02 None 05:01,03:23 01:01,13:03
RPKM HLA_C rpkm 87.41 ; HLA_A rpkm 51.19 ; HLA_B rpkm 8.68 ; HLA_DRB1 rpkm 1.19 ; HLA_DQA1 rpkm 0.03 ; HLA_DQB1 rpkm 0.17
Note In HLA_C 07:01 and 01:03 , HLA_B 27:05 , HLA_DRB1 13:03 , HLA_DQA1 03:02 , HLA_DQB1 05:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Non_small_cell_carcinoma, Mixed_adenosquamous_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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