Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Small_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
265 647

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,01:01 57:01,44:02 07:04,06:02 05:02,02:01 None 03:03,03:03 11:01,14:76
RPKM HLA_DRB1 rpkm 0.41 ; HLA_C rpkm 157.42 ; HLA_A rpkm 72.04 ; HLA_DQA1 rpkm 0.03 ; HLA_DQB1 rpkm 18.17 ; HLA_B rpkm 40.77
Note In HLA_C 07:04 , HLA_DQA1 05:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Small_cell_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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